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SRX26322565: Amplicon seq: lib1444
1 ILLUMINA (Illumina MiSeq) run: 118,317 spots, 21.5M bases, 6.4Mb downloads

Design: amplicon sequencing of target site of interest
Submitted by: Institute of Molecular and Clinical Ophthalmology
Study: High-efficiency base editing in the retina in primates and human tissues
show Abstracthide Abstract
Stargardt disease is a currently untreatable, inherited neurodegenerative disease that leads to macular degeneration and blindness due to loss-of-function mutations in the ABCA4 gene. We have designed a dual adeno-associated viral vector (AAV) encoding a split-intein adenine base editor to correct the most common mutation in ABCA4 (c.5882G>A, p.G1961E). We optimized ABCA4 base editing in human models, including retinal organoids, iPSC-derived retinal pigment epithelial (RPE) cells, as well as adult human retinal- and RPE/choroid explants in vitro. The resulting gene therapy vectors achieved high levels of gene correction in mutation-carrying mice and in female non-human primates (NHPs), with average editing of 75% of cones and 87% of RPE cells in vivo, which has the potential to translate to a clinical benefit. No off-target editing was detectable in human retinal- and RPE/choroid explants. The high editing rates in primates show promise for efficient gene editing in other ocular diseases that are targetable by base editing.
Sample: Figure 1E, lenti-ABCA41961E HEK293T
SAMN44109165 • SRS22849620 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: lib1444
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 118,317 spots, 21.5M bases, 6.4Mb
Run# of Spots# of BasesSizePublished
SRR30919231118,31721.5M6.4Mb2024-11-13

ID:
35547346

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